Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 AP002803.1-201ENST00000528836 498 ntBASIC19.2■□□□□ 0.66
COL23A1Q86Y22 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 MIR4649-201ENST00000582839 64 ntBASIC19.2■□□□□ 0.66
COL23A1Q86Y22 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 AC127024.7-201ENST00000625101 200 ntBASIC19.2■□□□□ 0.66
COL23A1Q86Y22 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 SAMD11P1-201ENST00000571429 661 ntBASIC19.19■□□□□ 0.66
COL23A1Q86Y22 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL23A1Q86Y22 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 PPOX-204ENST00000462866 473 ntTSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 DUX4L46-201ENST00000566845 751 ntBASIC19.18■□□□□ 0.66
COL23A1Q86Y22 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.18■□□□□ 0.66
COL23A1Q86Y22 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 SHC1P1-201ENST00000425230 1745 ntBASIC19.17■□□□□ 0.66
COL23A1Q86Y22 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms