Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDZRN4Q6ZMN7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.06■□□□□ 0.48
PDZRN4Q6ZMN7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PDZRN4Q6ZMN7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.06■□□□□ 0.48
PDZRN4Q6ZMN7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDZRN4Q6ZMN7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PDZRN4Q6ZMN7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AP003680.1-201ENST00000598970 3660 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 HCG4-201ENST00000418983 998 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 SPDYE11-202ENST00000450699 704 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 RN7SL589P-201ENST00000481268 310 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 SPDYE9P-201ENST00000570642 692 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AC091167.2-201ENST00000579581 588 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 SPDYE10P-202ENST00000612005 668 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 SPDYE8P-202ENST00000612377 668 ntBASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC18.05■□□□□ 0.48
PDZRN4Q6ZMN7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 HLA-J-203ENST00000494367 1087 ntBASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 AL161645.1-201ENST00000622716 1255 ntBASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 TOP3BP1-201ENST00000420768 1380 ntBASIC18.04■□□□□ 0.48
PDZRN4Q6ZMN7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 AC126335.2-201ENST00000623362 4637 ntBASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 AKAP8P1-201ENST00000434743 1349 ntBASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 FGD5P1-202ENST00000614866 2498 ntBASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 AL627223.1-201ENST00000416693 442 ntBASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.03■□□□□ 0.48
PDZRN4Q6ZMN7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms