Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 MEP1AP4-201ENST00000423244 1087 ntBASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 SLED1-202ENST00000512051 380 ntBASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 MIR8072-201ENST00000614241 80 ntBASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 AL158212.4-201ENST00000624062 1286 ntBASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFWD3Q6PCD5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 CICP13-201ENST00000422015 2789 ntBASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 MYCLP2-201ENST00000449268 967 ntBASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 AC123567.1-201ENST00000548294 1261 ntBASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 RARRES2P5-201ENST00000564013 466 ntBASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD3Q6PCD5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 CLK3P2-201ENST00000427566 1453 ntBASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFWD3Q6PCD5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 AC138035.3-201ENST00000622706 2791 ntBASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RFWD3Q6PCD5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms