Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 FAM21FP-201ENST00000426241 1131 ntBASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 AC079316.1-201ENST00000548397 411 ntBASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 AC008687.7-202ENST00000637404 953 ntBASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC62Q6P9F0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 AL138709.1-201ENST00000614840 1693 ntBASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC62Q6P9F0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC62Q6P9F0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.46■□□□□ 0.38
CCDC62Q6P9F0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC62Q6P9F0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.46■□□□□ 0.38
CCDC62Q6P9F0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC62Q6P9F0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 C2orf27AP3-201ENST00000434123 579 ntBASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AC025181.2-201ENST00000606994 802 ntBASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AC145423.3-201ENST00000615987 467 ntBASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AL354718.3-201ENST00000616414 581 ntBASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 CR382287.1-201ENST00000623954 586 ntBASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms