Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.25□□□□□ -0.13
NIPAL3Q6P499 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.25□□□□□ -0.13
NIPAL3Q6P499 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.24□□□□□ -0.13
NIPAL3Q6P499 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.24□□□□□ -0.13
NIPAL3Q6P499 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 KLF2P3-201ENST00000451977 1087 ntBASIC14.24□□□□□ -0.13
NIPAL3Q6P499 AC092183.1-201ENST00000469884 875 ntBASIC14.24□□□□□ -0.13
NIPAL3Q6P499 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 AC067863.1-201ENST00000494933 530 ntBASIC14.24□□□□□ -0.13
NIPAL3Q6P499 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 AC148477.4-201ENST00000613430 1793 ntBASIC14.24□□□□□ -0.13
NIPAL3Q6P499 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NIPAL3Q6P499 AC013726.1-201ENST00000563747 2285 ntBASIC14.24□□□□□ -0.13
NIPAL3Q6P499 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.23□□□□□ -0.13
NIPAL3Q6P499 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 AL645939.2-201ENST00000427340 991 ntBASIC14.23□□□□□ -0.13
NIPAL3Q6P499 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms