Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CBWD3Q5JTY5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 MROH4P-201ENST00000431302 1578 ntBASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CBWD3Q5JTY5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 AC023310.3-201ENST00000557027 670 ntBASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 AC100756.1-201ENST00000562736 682 ntBASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 AC138749.3-201ENST00000567691 622 ntBASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 AC116165.1-201ENST00000611806 668 ntBASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CBWD3Q5JTY5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.79■□□□□ 0.28
CBWD3Q5JTY5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBWD3Q5JTY5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBWD3Q5JTY5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBWD3Q5JTY5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBWD3Q5JTY5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CBWD3Q5JTY5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms