Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AP001282.1-201ENST00000531301 1499 ntBASIC11.72□□□□□ -0.53
HIST1H2BDP58876 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AC245100.5-201ENST00000452108 331 ntBASIC11.72□□□□□ -0.53
HIST1H2BDP58876 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 CYP2A7P1-201ENST00000595391 815 ntBASIC11.72□□□□□ -0.53
HIST1H2BDP58876 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 AL031595.1-201ENST00000623969 4709 ntBASIC11.72□□□□□ -0.53
HIST1H2BDP58876 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H2BDP58876 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 AL353692.3-201ENST00000407031 1396 ntBASIC11.71□□□□□ -0.53
HIST1H2BDP58876 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.71□□□□□ -0.53
HIST1H2BDP58876 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.71□□□□□ -0.54
HIST1H2BDP58876 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.71□□□□□ -0.54
HIST1H2BDP58876 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HIST1H2BDP58876 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms