Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CMC4P56277 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 AL645937.2-201ENST00000396808 931 ntBASIC11.6□□□□□ -0.55
CMC4P56277 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.6□□□□□ -0.55
CMC4P56277 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.6□□□□□ -0.55
CMC4P56277 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 GNAQP1-201ENST00000444815 1067 ntBASIC11.6□□□□□ -0.55
CMC4P56277 MYCLP2-201ENST00000449268 967 ntBASIC11.6□□□□□ -0.55
CMC4P56277 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.6□□□□□ -0.55
CMC4P56277 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.6□□□□□ -0.55
CMC4P56277 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.6□□□□□ -0.55
CMC4P56277 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 PCDHA1-201ENST00000378133 2726 ntBASIC11.6□□□□□ -0.55
CMC4P56277 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 TMBIM7P-203ENST00000641617 1718 ntBASIC11.6□□□□□ -0.55
CMC4P56277 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.59□□□□□ -0.55
CMC4P56277 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 AC084364.1-201ENST00000551967 1556 ntBASIC11.59□□□□□ -0.55
CMC4P56277 CLK3P2-201ENST00000427566 1453 ntBASIC11.59□□□□□ -0.55
CMC4P56277 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CMC4P56277 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CMC4P56277 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CMC4P56277 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.59□□□□□ -0.55
CMC4P56277 CRB3P1-201ENST00000449338 276 ntBASIC11.59□□□□□ -0.55
CMC4P56277 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
CMC4P56277 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.59□□□□□ -0.55
CMC4P56277 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.59□□□□□ -0.55
CMC4P56277 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.59□□□□□ -0.55
CMC4P56277 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CMC4P56277 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
CMC4P56277 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CMC4P56277 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms