Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDE6BP35913 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
PDE6BP35913 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.99■□□□□ 0.63
PDE6BP35913 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6BP35913 AL133499.1-201ENST00000596207 608 ntBASIC18.99■□□□□ 0.63
PDE6BP35913 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE6BP35913 BNIP3P13-201ENST00000599968 566 ntBASIC18.99■□□□□ 0.63
PDE6BP35913 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6BP35913 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PDE6BP35913 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 FLJ38576-201ENST00000623820 2459 ntBASIC18.99■□□□□ 0.63
PDE6BP35913 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE6BP35913 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6BP35913 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
PDE6BP35913 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6BP35913 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6BP35913 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 PRORSD1P-202ENST00000563365 2154 ntBASIC18.98■□□□□ 0.63
PDE6BP35913 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PDE6BP35913 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDE6BP35913 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6BP35913 AL596276.2-201ENST00000447525 331 ntBASIC18.98■□□□□ 0.63
PDE6BP35913 AC012618.1-201ENST00000461223 412 ntBASIC18.98■□□□□ 0.63
PDE6BP35913 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6BP35913 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.98■□□□□ 0.63
PDE6BP35913 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.98■□□□□ 0.63
PDE6BP35913 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.98■□□□□ 0.63
PDE6BP35913 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6BP35913 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.98■□□□□ 0.63
PDE6BP35913 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE6BP35913 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PDE6BP35913 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.98■□□□□ 0.63
PDE6BP35913 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
PDE6BP35913 AC018695.7-201ENST00000624587 2492 ntBASIC18.98■□□□□ 0.63
PDE6BP35913 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PDE6BP35913 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6BP35913 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.97■□□□□ 0.63
PDE6BP35913 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.97■□□□□ 0.63
PDE6BP35913 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 ACTG1P2-201ENST00000415776 1125 ntBASIC18.97■□□□□ 0.63
PDE6BP35913 RPL17P11-201ENST00000417593 544 ntBASIC18.97■□□□□ 0.63
PDE6BP35913 ACTG1P11-201ENST00000425411 1125 ntBASIC18.97■□□□□ 0.63
PDE6BP35913 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.97■□□□□ 0.63
PDE6BP35913 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.97■□□□□ 0.63
PDE6BP35913 RN7SL163P-201ENST00000583100 276 ntBASIC18.97■□□□□ 0.63
PDE6BP35913 AC004923.1-202ENST00000642106 209 ntBASIC18.97■□□□□ 0.63
PDE6BP35913 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.97■□□□□ 0.63
PDE6BP35913 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6BP35913 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDE6BP35913 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDE6BP35913 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6BP35913 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.96■□□□□ 0.63
PDE6BP35913 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.96■□□□□ 0.63
PDE6BP35913 RNMTL1P1-201ENST00000454103 560 ntBASIC18.96■□□□□ 0.63
PDE6BP35913 TUBB8P8-201ENST00000458717 1058 ntBASIC18.96■□□□□ 0.63
PDE6BP35913 AC008267.1-201ENST00000474858 1069 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms