Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.64■□□□□ 0.89
USP6P35125 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
USP6P35125 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.64■□□□□ 0.89
USP6P35125 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.64■□□□□ 0.89
USP6P35125 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20.64■□□□□ 0.89
USP6P35125 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP6P35125 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.63■□□□□ 0.89
USP6P35125 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.63■□□□□ 0.89
USP6P35125 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC20.63■□□□□ 0.89
USP6P35125 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.63■□□□□ 0.89
USP6P35125 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.63■□□□□ 0.89
USP6P35125 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.63■□□□□ 0.89
USP6P35125 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.63■□□□□ 0.89
USP6P35125 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 FKBP4P6-201ENST00000457486 1332 ntBASIC20.63■□□□□ 0.89
USP6P35125 AC099398.1-201ENST00000567919 2776 ntBASIC20.63■□□□□ 0.89
USP6P35125 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
USP6P35125 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP6P35125 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.62■□□□□ 0.89
USP6P35125 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 RNMTL1P1-201ENST00000454103 560 ntBASIC20.62■□□□□ 0.89
USP6P35125 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 RN7SL11P-201ENST00000471305 293 ntBASIC20.62■□□□□ 0.89
USP6P35125 AC005740.2-201ENST00000511085 419 ntBASIC20.62■□□□□ 0.89
USP6P35125 AC245884.6-201ENST00000515672 1067 ntBASIC20.62■□□□□ 0.89
USP6P35125 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.62■□□□□ 0.89
USP6P35125 RN7SL774P-201ENST00000577467 290 ntBASIC20.62■□□□□ 0.89
USP6P35125 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.62■□□□□ 0.89
USP6P35125 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.62■□□□□ 0.89
USP6P35125 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.62■□□□□ 0.89
USP6P35125 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
USP6P35125 AC020916.1-201ENST00000587762 1774 ntBASIC20.62■□□□□ 0.89
USP6P35125 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 AC011840.2-201ENST00000563063 1520 ntBASIC20.62■□□□□ 0.89
USP6P35125 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP6P35125 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.62■□□□□ 0.89
USP6P35125 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 AC010141.1-201ENST00000411585 623 ntBASIC20.61■□□□□ 0.89
USP6P35125 RN7SL720P-201ENST00000488178 304 ntBASIC20.61■□□□□ 0.89
USP6P35125 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.61■□□□□ 0.89
USP6P35125 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.61■□□□□ 0.89
USP6P35125 AC106794.1-201ENST00000506935 792 ntBASIC20.61■□□□□ 0.89
USP6P35125 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.61■□□□□ 0.89
USP6P35125 AC024681.1-201ENST00000521917 487 ntBASIC20.61■□□□□ 0.89
USP6P35125 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
USP6P35125 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 AC005324.6-201ENST00000587972 613 ntBASIC20.61■□□□□ 0.89
USP6P35125 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6P35125 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 INE2-201ENST00000630399 1874 ntBASIC20.61■□□□□ 0.89
USP6P35125 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6P35125 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
USP6P35125 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.61■□□□□ 0.89
USP6P35125 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms