Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CD40P25942 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
CD40P25942 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CD40P25942 AC005229.1-201ENST00000392885 409 ntBASIC13.41□□□□□ -0.26
CD40P25942 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 BAATP1-201ENST00000412284 1225 ntBASIC13.41□□□□□ -0.26
CD40P25942 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 AL355864.2-201ENST00000447420 863 ntBASIC13.41□□□□□ -0.26
CD40P25942 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 AC022210.1-201ENST00000449856 793 ntBASIC13.41□□□□□ -0.26
CD40P25942 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 AC093433.1-201ENST00000458048 571 ntBASIC13.41□□□□□ -0.26
CD40P25942 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CD40P25942 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 AP001582.1-201ENST00000525856 295 ntBASIC13.41□□□□□ -0.26
CD40P25942 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CD40P25942 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.41□□□□□ -0.26
CD40P25942 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 AC025181.2-201ENST00000606994 802 ntBASIC13.41□□□□□ -0.26
CD40P25942 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CD40P25942 DOC2GP-204ENST00000639052 2548 ntBASIC13.41□□□□□ -0.26
CD40P25942 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.41□□□□□ -0.26
CD40P25942 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CD40P25942 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 AC134312.5-201ENST00000568031 1313 ntBASIC13.4□□□□□ -0.26
CD40P25942 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CD40P25942 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CD40P25942 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.4□□□□□ -0.26
CD40P25942 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CD40P25942 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.4□□□□□ -0.26
CD40P25942 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.4□□□□□ -0.26
CD40P25942 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CD40P25942 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.4□□□□□ -0.26
CD40P25942 ACKR1-201ENST00000368121 1240 ntBASIC13.4□□□□□ -0.26
CD40P25942 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CD40P25942 MIR658-201ENST00000385210 100 ntBASIC13.4□□□□□ -0.26
CD40P25942 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 MIR1909-201ENST00000411312 80 ntBASIC13.4□□□□□ -0.26
CD40P25942 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.4□□□□□ -0.26
CD40P25942 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.4□□□□□ -0.26
CD40P25942 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.4□□□□□ -0.26
CD40P25942 BCRP2-202ENST00000447763 634 ntBASIC13.4□□□□□ -0.26
CD40P25942 CROCCP4-201ENST00000457096 498 ntBASIC13.4□□□□□ -0.26
CD40P25942 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.4□□□□□ -0.26
CD40P25942 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CD40P25942 BCRP6-201ENST00000510112 632 ntBASIC13.4□□□□□ -0.26
CD40P25942 BCRP7-201ENST00000511549 544 ntBASIC13.4□□□□□ -0.26
CD40P25942 AP001889.1-201ENST00000525414 633 ntBASIC13.4□□□□□ -0.26
CD40P25942 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms