Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.44■□□□□ 0.7
ITGB4P16144 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.44■□□□□ 0.7
ITGB4P16144 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.44■□□□□ 0.7
ITGB4P16144 AL359258.3-201ENST00000622910 2331 ntBASIC19.44■□□□□ 0.7
ITGB4P16144 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.44■□□□□ 0.7
ITGB4P16144 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC19.44■□□□□ 0.7
ITGB4P16144 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 AL355334.1-201ENST00000417713 215 ntBASIC19.44■□□□□ 0.7
ITGB4P16144 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.44■□□□□ 0.7
ITGB4P16144 DUX4L46-201ENST00000566845 751 ntBASIC19.44■□□□□ 0.7
ITGB4P16144 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 AL353770.1-201ENST00000614915 403 ntBASIC19.44■□□□□ 0.7
ITGB4P16144 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.44■□□□□ 0.7
ITGB4P16144 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGB4P16144 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.44■□□□□ 0.7
ITGB4P16144 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ITGB4P16144 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 PCDH8P1-201ENST00000428983 2773 ntBASIC19.43■□□□□ 0.7
ITGB4P16144 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.43■□□□□ 0.7
ITGB4P16144 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ITGB4P16144 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ITGB4P16144 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.43■□□□□ 0.7
ITGB4P16144 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ITGB4P16144 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.43■□□□□ 0.7
ITGB4P16144 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.43■□□□□ 0.7
ITGB4P16144 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.43■□□□□ 0.7
ITGB4P16144 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.43■□□□□ 0.7
ITGB4P16144 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
ITGB4P16144 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ITGB4P16144 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.43■□□□□ 0.7
ITGB4P16144 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.43■□□□□ 0.7
ITGB4P16144 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.43■□□□□ 0.7
ITGB4P16144 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.43■□□□□ 0.7
ITGB4P16144 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITGB4P16144 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ITGB4P16144 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ITGB4P16144 AC105250.1-201ENST00000509378 2057 ntBASIC19.42■□□□□ 0.7
ITGB4P16144 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.42■□□□□ 0.7
ITGB4P16144 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ITGB4P16144 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.42■□□□□ 0.7
ITGB4P16144 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 AC006335.1-201ENST00000445200 547 ntBASIC19.42■□□□□ 0.7
ITGB4P16144 NDUFS6P1-201ENST00000485187 316 ntBASIC19.42■□□□□ 0.7
ITGB4P16144 ALG3P1-201ENST00000508806 1114 ntBASIC19.42■□□□□ 0.7
ITGB4P16144 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ITGB4P16144 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ITGB4P16144 RPL17P45-201ENST00000586289 509 ntBASIC19.42■□□□□ 0.7
ITGB4P16144 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 RNF165-205ENST00000588679 2904 ntBASIC19.42■□□□□ 0.7
ITGB4P16144 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.42■□□□□ 0.7
ITGB4P16144 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITGB4P16144 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.41■□□□□ 0.7
ITGB4P16144 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.41■□□□□ 0.7
ITGB4P16144 AC019193.1-201ENST00000506678 823 ntBASIC19.41■□□□□ 0.7
ITGB4P16144 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
ITGB4P16144 AC242376.1-201ENST00000559033 726 ntBASIC19.41■□□□□ 0.7
ITGB4P16144 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ITGB4P16144 MIR3677-201ENST00000578964 60 ntBASIC19.41■□□□□ 0.7
ITGB4P16144 AC008805.1-201ENST00000590892 364 ntBASIC19.41■□□□□ 0.7
ITGB4P16144 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.41■□□□□ 0.7
ITGB4P16144 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.41■□□□□ 0.7
ITGB4P16144 AC006453.1-201ENST00000636037 1257 ntBASIC19.41■□□□□ 0.7
ITGB4P16144 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.41■□□□□ 0.7
ITGB4P16144 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB4P16144 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ITGB4P16144 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITGB4P16144 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms