Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC130P13994 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC130P13994 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC130P13994 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC130P13994 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.5■□□□□ 0.23
CCDC130P13994 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC130P13994 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC130P13994 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC130P13994 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC130P13994 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC130P13994 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC130P13994 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC130P13994 AC025181.2-201ENST00000606994 802 ntBASIC16.5■□□□□ 0.23
CCDC130P13994 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC130P13994 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC130P13994 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC130P13994 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CCDC130P13994 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC130P13994 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC130P13994 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC130P13994 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC130P13994 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC130P13994 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC130P13994 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC130P13994 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC130P13994 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC130P13994 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC130P13994 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC130P13994 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.49■□□□□ 0.23
CCDC130P13994 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC130P13994 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC130P13994 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CCDC130P13994 AL359711.2-201ENST00000563105 872 ntBASIC16.49■□□□□ 0.23
CCDC130P13994 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC130P13994 INTS4P2-202ENST00000614726 2019 ntBASIC16.49■□□□□ 0.23
CCDC130P13994 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC130P13994 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC130P13994 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC130P13994 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
CCDC130P13994 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC130P13994 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC130P13994 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC130P13994 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC130P13994 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC130P13994 COX5BP8-201ENST00000416911 349 ntBASIC16.48■□□□□ 0.23
CCDC130P13994 AL442647.2-201ENST00000429864 857 ntBASIC16.48■□□□□ 0.23
CCDC130P13994 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC130P13994 RN7SL752P-201ENST00000463779 287 ntBASIC16.48■□□□□ 0.23
CCDC130P13994 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CCDC130P13994 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC130P13994 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC130P13994 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
CCDC130P13994 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC130P13994 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC130P13994 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC130P13994 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC130P13994 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms