Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC22.24■■□□□ 1.15
CHGAP10645 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHGAP10645 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHGAP10645 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHGAP10645 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC22.24■■□□□ 1.15
CHGAP10645 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHGAP10645 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC22.24■■□□□ 1.15
CHGAP10645 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHGAP10645 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHGAP10645 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC22.23■■□□□ 1.15
CHGAP10645 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC22.23■■□□□ 1.15
CHGAP10645 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC22.23■■□□□ 1.15
CHGAP10645 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC22.23■■□□□ 1.15
CHGAP10645 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 SNX21-203ENST00000372541 771 ntTSL 2 BASIC22.23■■□□□ 1.15
CHGAP10645 AL662890.1-201ENST00000396818 632 ntBASIC22.23■■□□□ 1.15
CHGAP10645 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC22.23■■□□□ 1.15
CHGAP10645 NUS1P3-201ENST00000423502 862 ntBASIC22.23■■□□□ 1.15
CHGAP10645 FAM8A4P-201ENST00000435433 1213 ntBASIC22.23■■□□□ 1.15
CHGAP10645 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CHGAP10645 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC22.23■■□□□ 1.15
CHGAP10645 AC105129.2-201ENST00000559536 390 ntBASIC22.23■■□□□ 1.15
CHGAP10645 AC016629.1-201ENST00000596579 586 ntBASIC22.23■■□□□ 1.15
CHGAP10645 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC22.23■■□□□ 1.15
CHGAP10645 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CHGAP10645 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHGAP10645 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC22.23■■□□□ 1.15
CHGAP10645 PCDHA14-201ENST00000506751 2298 ntBASIC22.23■■□□□ 1.15
CHGAP10645 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CHGAP10645 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC22.23■■□□□ 1.15
CHGAP10645 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC22.22■■□□□ 1.15
CHGAP10645 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC22.22■■□□□ 1.15
CHGAP10645 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CHGAP10645 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.22■■□□□ 1.15
CHGAP10645 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC22.22■■□□□ 1.15
CHGAP10645 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC22.22■■□□□ 1.15
CHGAP10645 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CHGAP10645 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC22.22■■□□□ 1.15
CHGAP10645 RPS15-201ENST00000233609 534 ntTSL 2 BASIC22.22■■□□□ 1.15
CHGAP10645 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC22.22■■□□□ 1.15
CHGAP10645 CSH2-202ENST00000345366 598 ntTSL 5 BASIC22.22■■□□□ 1.15
CHGAP10645 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 HNRNPA1P63-201ENST00000427917 963 ntBASIC22.22■■□□□ 1.15
CHGAP10645 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC22.22■■□□□ 1.15
CHGAP10645 POM121L10P-201ENST00000436994 1285 ntBASIC22.22■■□□□ 1.15
CHGAP10645 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 RPS15-205ENST00000586686 562 ntTSL 5 BASIC22.22■■□□□ 1.15
CHGAP10645 RPS15-208ENST00000591804 711 ntTSL 5 BASIC22.22■■□□□ 1.15
CHGAP10645 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC22.22■■□□□ 1.15
CHGAP10645 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 PCDHA12-202ENST00000613593 2588 ntBASIC22.22■■□□□ 1.15
CHGAP10645 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHGAP10645 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CHGAP10645 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CHGAP10645 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC22.21■■□□□ 1.15
CHGAP10645 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC22.21■■□□□ 1.15
CHGAP10645 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 COX5BP1-201ENST00000507622 393 ntBASIC22.21■■□□□ 1.15
CHGAP10645 INO80C-210ENST00000590757 595 ntTSL 2 BASIC22.21■■□□□ 1.15
CHGAP10645 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC22.21■■□□□ 1.15
CHGAP10645 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CHGAP10645 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
CHGAP10645 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHGAP10645 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHGAP10645 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC22.21■■□□□ 1.15
CHGAP10645 AL158070.2-201ENST00000623713 1621 ntBASIC22.2■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms