Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CALM3P0DP25 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.04■□□□□ 0.48
CALM3P0DP25 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 AC092384.3-202ENST00000564646 2873 ntBASIC18.04■□□□□ 0.48
CALM3P0DP25 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 AC104457.1-201ENST00000401024 814 ntBASIC18.04■□□□□ 0.48
CALM3P0DP25 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.04■□□□□ 0.48
CALM3P0DP25 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.04■□□□□ 0.48
CALM3P0DP25 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.04■□□□□ 0.48
CALM3P0DP25 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.04■□□□□ 0.48
CALM3P0DP25 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.04■□□□□ 0.48
CALM3P0DP25 AC133539.2-201ENST00000604757 467 ntBASIC18.04■□□□□ 0.48
CALM3P0DP25 AC107373.2-201ENST00000607735 490 ntBASIC18.04■□□□□ 0.48
CALM3P0DP25 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
CALM3P0DP25 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.04■□□□□ 0.48
CALM3P0DP25 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CALM3P0DP25 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 AC148477.4-201ENST00000613430 1793 ntBASIC18.04■□□□□ 0.48
CALM3P0DP25 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.04■□□□□ 0.48
CALM3P0DP25 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALM3P0DP25 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.03■□□□□ 0.48
CALM3P0DP25 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CALM3P0DP25 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.03■□□□□ 0.48
CALM3P0DP25 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.03■□□□□ 0.48
CALM3P0DP25 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.03■□□□□ 0.48
CALM3P0DP25 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.03■□□□□ 0.48
CALM3P0DP25 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 AC068587.6-202ENST00000641839 5619 ntBASIC18.03■□□□□ 0.48
CALM3P0DP25 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CALM3P0DP25 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.03■□□□□ 0.48
CALM3P0DP25 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALM3P0DP25 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.02■□□□□ 0.48
CALM3P0DP25 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.02■□□□□ 0.48
CALM3P0DP25 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.02■□□□□ 0.48
CALM3P0DP25 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.02■□□□□ 0.48
CALM3P0DP25 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CALM3P0DP25 C1QBPP1-201ENST00000400117 770 ntBASIC18.02■□□□□ 0.48
CALM3P0DP25 SOCS2P1-201ENST00000417727 557 ntBASIC18.02■□□□□ 0.48
CALM3P0DP25 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.02■□□□□ 0.48
CALM3P0DP25 AC073347.1-201ENST00000421633 2643 ntBASIC18.02■□□□□ 0.48
CALM3P0DP25 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.02■□□□□ 0.48
CALM3P0DP25 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.02■□□□□ 0.48
CALM3P0DP25 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALM3P0DP25 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms