Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM228BP0C875 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
FAM228BP0C875 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
FAM228BP0C875 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.63■□□□□ 0.25
FAM228BP0C875 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
FAM228BP0C875 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 AL080243.2-201ENST00000418783 582 ntBASIC16.63■□□□□ 0.25
FAM228BP0C875 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
FAM228BP0C875 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.63■□□□□ 0.25
FAM228BP0C875 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 MIR6080-201ENST00000617359 66 ntBASIC16.63■□□□□ 0.25
FAM228BP0C875 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.63■□□□□ 0.25
FAM228BP0C875 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.63■□□□□ 0.25
FAM228BP0C875 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 REXO1L2P-201ENST00000425429 2069 ntBASIC16.63■□□□□ 0.25
FAM228BP0C875 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
FAM228BP0C875 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FAM228BP0C875 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 AC005912.2-201ENST00000619492 2400 ntBASIC16.62■□□□□ 0.25
FAM228BP0C875 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 RPSAP43-201ENST00000402237 625 ntBASIC16.62■□□□□ 0.25
FAM228BP0C875 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 AC023141.5-201ENST00000458585 616 ntBASIC16.62■□□□□ 0.25
FAM228BP0C875 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
FAM228BP0C875 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.62■□□□□ 0.25
FAM228BP0C875 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.62■□□□□ 0.25
FAM228BP0C875 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
FAM228BP0C875 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.62■□□□□ 0.25
FAM228BP0C875 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 Z97205.2-201ENST00000564697 1639 ntBASIC16.62■□□□□ 0.25
FAM228BP0C875 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
FAM228BP0C875 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.62■□□□□ 0.25
FAM228BP0C875 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FAM228BP0C875 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FAM228BP0C875 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM228BP0C875 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FAM228BP0C875 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM228BP0C875 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms