Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC6P09630 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HOXC6P09630 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
HOXC6P09630 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXC6P09630 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.43■□□□□ 0.38
HOXC6P09630 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXC6P09630 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC6P09630 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXC6P09630 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXC6P09630 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXC6P09630 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXC6P09630 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXC6P09630 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HOXC6P09630 AC007663.3-201ENST00000609632 465 ntBASIC17.43■□□□□ 0.38
HOXC6P09630 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.43■□□□□ 0.38
HOXC6P09630 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HOXC6P09630 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXC6P09630 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXC6P09630 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HOXC6P09630 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC6P09630 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC6P09630 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HOXC6P09630 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HOXC6P09630 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC6P09630 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HOXC6P09630 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HOXC6P09630 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC6P09630 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HOXC6P09630 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC6P09630 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 NKAIN1P1-201ENST00000435754 582 ntBASIC17.42■□□□□ 0.38
HOXC6P09630 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC6P09630 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC6P09630 SERPINA13P-202ENST00000478994 924 ntBASIC17.42■□□□□ 0.38
HOXC6P09630 AC004066.1-201ENST00000502488 802 ntBASIC17.42■□□□□ 0.38
HOXC6P09630 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.42■□□□□ 0.38
HOXC6P09630 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC6P09630 RN7SL713P-201ENST00000582127 302 ntBASIC17.42■□□□□ 0.38
HOXC6P09630 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC6P09630 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC6P09630 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC6P09630 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC6P09630 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC6P09630 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC6P09630 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HOXC6P09630 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC6P09630 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC6P09630 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC6P09630 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC6P09630 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 POM121L8P-201ENST00000417732 1281 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HOXC6P09630 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXC6P09630 POM121L9P-203ENST00000441984 1285 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC6P09630 PPY2P-201ENST00000582808 702 ntBASIC17.41■□□□□ 0.38
HOXC6P09630 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms