Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ALG1L5P-201ENST00000482043 771 ntBASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 MTDHP5-201ENST00000598980 586 ntBASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AC099522.2-201ENST00000607001 744 ntBASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AL161645.1-201ENST00000622716 1255 ntBASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 AC104581.4-201ENST00000623126 3052 ntBASIC14.1□□□□□ -0.15
HLA-DPB1P04440 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DPB1P04440 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 AC127383.1-201ENST00000444697 1800 ntBASIC14.09□□□□□ -0.15
HLA-DPB1P04440 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 AL645939.2-201ENST00000427340 991 ntBASIC14.09□□□□□ -0.15
HLA-DPB1P04440 KRT18P34-201ENST00000488218 1270 ntBASIC14.09□□□□□ -0.15
HLA-DPB1P04440 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 AC010327.4-202ENST00000591484 748 ntBASIC14.09□□□□□ -0.15
HLA-DPB1P04440 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 AC092902.6-201ENST00000641783 218 ntBASIC14.09□□□□□ -0.15
HLA-DPB1P04440 AC126335.2-201ENST00000623362 4637 ntBASIC14.09□□□□□ -0.15
HLA-DPB1P04440 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DPB1P04440 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DPB1P04440 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.08□□□□□ -0.15
HLA-DPB1P04440 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.08□□□□□ -0.15
HLA-DPB1P04440 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DPB1P04440 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DPB1P04440 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DPB1P04440 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms