Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TUBB4AP04350 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB4AP04350 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB4AP04350 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB4AP04350 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB4AP04350 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB4AP04350 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TUBB4AP04350 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.75■□□□□ 0.27
TUBB4AP04350 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TUBB4AP04350 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 AP001267.2-201ENST00000532619 2086 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TUBB4AP04350 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.75■□□□□ 0.27
TUBB4AP04350 AC073621.1-201ENST00000392730 636 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 AC092474.2-201ENST00000424288 719 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 TPT1P11-201ENST00000458482 498 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.75■□□□□ 0.27
TUBB4AP04350 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 MIR3652-201ENST00000579335 131 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 MIR3180-1-201ENST00000580374 94 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.75■□□□□ 0.27
TUBB4AP04350 MIR3180-3-201ENST00000584616 94 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 AC107918.4-202ENST00000641623 219 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 AC084364.1-201ENST00000551967 1556 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.75■□□□□ 0.27
TUBB4AP04350 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TUBB4AP04350 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.75■□□□□ 0.27
TUBB4AP04350 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 AC087386.2-201ENST00000623212 4637 ntBASIC16.75■□□□□ 0.27
TUBB4AP04350 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TUBB4AP04350 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TUBB4AP04350 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.74■□□□□ 0.27
TUBB4AP04350 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TUBB4AP04350 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TUBB4AP04350 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 KRT126P-201ENST00000549467 1181 ntBASIC16.74■□□□□ 0.27
TUBB4AP04350 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.74■□□□□ 0.27
TUBB4AP04350 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.74■□□□□ 0.27
TUBB4AP04350 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.74■□□□□ 0.27
TUBB4AP04350 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.74■□□□□ 0.27
TUBB4AP04350 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.74■□□□□ 0.27
TUBB4AP04350 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TUBB4AP04350 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TUBB4AP04350 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TUBB4AP04350 AC055811.4-201ENST00000624039 1754 ntBASIC16.74■□□□□ 0.27
TUBB4AP04350 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TUBB4AP04350 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TUBB4AP04350 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms