Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 PEG13-201ENST00000631594 5667 ntBASIC14.08□□□□□ -0.16
HLA-DQA2P01906 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 AL353705.2-201ENST00000428243 662 ntBASIC14.08□□□□□ -0.16
HLA-DQA2P01906 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 AC055717.3-201ENST00000622967 595 ntBASIC14.08□□□□□ -0.16
HLA-DQA2P01906 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 KRT18P32-201ENST00000424695 1287 ntBASIC14.07□□□□□ -0.16
HLA-DQA2P01906 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 PGAM5P1-201ENST00000518923 814 ntBASIC14.07□□□□□ -0.16
HLA-DQA2P01906 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 AC005829.1-201ENST00000570002 483 ntBASIC14.07□□□□□ -0.16
HLA-DQA2P01906 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 ELL2P1-201ENST00000413990 1906 ntBASIC14.07□□□□□ -0.16
HLA-DQA2P01906 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DQA2P01906 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 AC126335.2-201ENST00000623362 4637 ntBASIC14.06□□□□□ -0.16
HLA-DQA2P01906 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DQA2P01906 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms