Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 MIR1227-201ENST00000408484 88 ntBASIC17.51■□□□□ 0.39
ALDH1A1P00352 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AC073150.1-201ENST00000450406 1084 ntBASIC17.51■□□□□ 0.39
ALDH1A1P00352 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 RN7SL258P-201ENST00000478664 300 ntBASIC17.51■□□□□ 0.39
ALDH1A1P00352 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AP000593.2-201ENST00000542775 1433 ntBASIC17.51■□□□□ 0.39
ALDH1A1P00352 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AL645728.2-202ENST00000641679 227 ntBASIC17.51■□□□□ 0.39
ALDH1A1P00352 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ALDH1A1P00352 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ALDH1A1P00352 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 AC079112.1-201ENST00000454972 939 ntBASIC17.5■□□□□ 0.39
ALDH1A1P00352 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 AC009779.1-201ENST00000551138 283 ntBASIC17.5■□□□□ 0.39
ALDH1A1P00352 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ALDH1A1P00352 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ALDH1A1P00352 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ALDH1A1P00352 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 AL157792.1-201ENST00000488281 530 ntBASIC17.49■□□□□ 0.39
ALDH1A1P00352 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.49■□□□□ 0.39
ALDH1A1P00352 DUX4L46-201ENST00000566845 751 ntBASIC17.49■□□□□ 0.39
ALDH1A1P00352 AL358472.3-201ENST00000608147 415 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms