Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SIX6O95475 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.12□□□□□ -0.31
SIX6O95475 AC093724.1-201ENST00000448659 1027 ntBASIC13.12□□□□□ -0.31
SIX6O95475 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.12□□□□□ -0.31
SIX6O95475 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.12□□□□□ -0.31
SIX6O95475 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.12□□□□□ -0.31
SIX6O95475 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 NSUN5P1-202ENST00000421140 1535 ntBASIC13.12□□□□□ -0.31
SIX6O95475 NSUN5P2-203ENST00000457352 1529 ntBASIC13.12□□□□□ -0.31
SIX6O95475 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 AC152010.1-201ENST00000415779 2006 ntBASIC13.12□□□□□ -0.31
SIX6O95475 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SIX6O95475 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.11□□□□□ -0.31
SIX6O95475 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SIX6O95475 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.11□□□□□ -0.31
SIX6O95475 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.11□□□□□ -0.31
SIX6O95475 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SIX6O95475 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.11□□□□□ -0.31
SIX6O95475 AC092647.4-201ENST00000457211 535 ntBASIC13.11□□□□□ -0.31
SIX6O95475 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.11□□□□□ -0.31
SIX6O95475 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.11□□□□□ -0.31
SIX6O95475 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 MIR4497-201ENST00000583208 89 ntBASIC13.11□□□□□ -0.31
SIX6O95475 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SIX6O95475 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.11□□□□□ -0.31
SIX6O95475 AL365330.1-201ENST00000607459 531 ntBASIC13.11□□□□□ -0.31
SIX6O95475 AC114341.1-201ENST00000618070 349 ntBASIC13.11□□□□□ -0.31
SIX6O95475 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.11□□□□□ -0.31
SIX6O95475 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SIX6O95475 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms