Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LTN1O94822 KRT18P36-201ENST00000411618 1276 ntBASIC20.16■□□□□ 0.82
LTN1O94822 CEP164P1-201ENST00000455142 418 ntBASIC20.16■□□□□ 0.82
LTN1O94822 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.16■□□□□ 0.82
LTN1O94822 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.16■□□□□ 0.82
LTN1O94822 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.16■□□□□ 0.82
LTN1O94822 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.16■□□□□ 0.82
LTN1O94822 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTN1O94822 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 AL513523.2-202ENST00000427283 2040 ntBASIC20.15■□□□□ 0.82
LTN1O94822 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.15■□□□□ 0.82
LTN1O94822 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LTN1O94822 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LTN1O94822 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LTN1O94822 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 VDAC1P1-201ENST00000439229 848 ntBASIC20.15■□□□□ 0.82
LTN1O94822 AC234782.1-201ENST00000451950 919 ntBASIC20.15■□□□□ 0.82
LTN1O94822 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.15■□□□□ 0.82
LTN1O94822 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.15■□□□□ 0.82
LTN1O94822 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
LTN1O94822 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.15■□□□□ 0.82
LTN1O94822 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.15■□□□□ 0.82
LTN1O94822 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LTN1O94822 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.14■□□□□ 0.82
LTN1O94822 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LTN1O94822 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LTN1O94822 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.14■□□□□ 0.82
LTN1O94822 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
LTN1O94822 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC20.14■□□□□ 0.81
LTN1O94822 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.14■□□□□ 0.81
LTN1O94822 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.14■□□□□ 0.81
LTN1O94822 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 MIR4722-201ENST00000578292 60 ntBASIC20.14■□□□□ 0.81
LTN1O94822 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LTN1O94822 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
LTN1O94822 CU633904.3-201ENST00000624042 1029 ntBASIC20.14■□□□□ 0.81
LTN1O94822 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 AL139384.1-201ENST00000612143 3047 ntBASIC20.14■□□□□ 0.81
LTN1O94822 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LTN1O94822 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LTN1O94822 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LTN1O94822 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LTN1O94822 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LTN1O94822 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.13■□□□□ 0.81
LTN1O94822 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.13■□□□□ 0.81
LTN1O94822 AC021723.1-201ENST00000486306 515 ntBASIC20.13■□□□□ 0.81
LTN1O94822 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.13■□□□□ 0.81
LTN1O94822 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
LTN1O94822 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.13■□□□□ 0.81
LTN1O94822 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.13■□□□□ 0.81
LTN1O94822 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LTN1O94822 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LTN1O94822 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LTN1O94822 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LTN1O94822 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 RN7SL181P-201ENST00000462921 277 ntBASIC20.13■□□□□ 0.81
LTN1O94822 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.13■□□□□ 0.81
LTN1O94822 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.13■□□□□ 0.81
LTN1O94822 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.13■□□□□ 0.81
LTN1O94822 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.13■□□□□ 0.81
LTN1O94822 AL161670.2-201ENST00000557650 1227 ntBASIC20.13■□□□□ 0.81
LTN1O94822 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC20.13■□□□□ 0.81
LTN1O94822 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms