Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.68■□□□□ 0.1
SMAD6O43541 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SMAD6O43541 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMAD6O43541 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SMAD6O43541 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.67■□□□□ 0.1
SMAD6O43541 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SMAD6O43541 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.67■□□□□ 0.1
SMAD6O43541 ACA64.2-201ENST00000459014 129 ntBASIC15.67■□□□□ 0.1
SMAD6O43541 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.67■□□□□ 0.1
SMAD6O43541 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.67■□□□□ 0.1
SMAD6O43541 AC068587.3-201ENST00000526613 355 ntBASIC15.67■□□□□ 0.1
SMAD6O43541 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.67■□□□□ 0.1
SMAD6O43541 AC106886.1-201ENST00000568660 600 ntBASIC15.67■□□□□ 0.1
SMAD6O43541 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.67■□□□□ 0.1
SMAD6O43541 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SMAD6O43541 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.67■□□□□ 0.1
SMAD6O43541 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.67■□□□□ 0.1
SMAD6O43541 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 CICP11-201ENST00000434745 2827 ntBASIC15.67■□□□□ 0.1
SMAD6O43541 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.67■□□□□ 0.1
SMAD6O43541 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.67■□□□□ 0.1
SMAD6O43541 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SMAD6O43541 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.66■□□□□ 0.1
SMAD6O43541 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 BAATP1-201ENST00000412284 1225 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.66■□□□□ 0.1
SMAD6O43541 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 BCRP2-202ENST00000447763 634 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMAD6O43541 GPR53P-205ENST00000457298 1084 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 BCRP6-201ENST00000510112 632 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 BCRP7-201ENST00000511549 544 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.66■□□□□ 0.1
SMAD6O43541 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.66■□□□□ 0.1
SMAD6O43541 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.66■□□□□ 0.1
SMAD6O43541 AP001889.1-201ENST00000525414 633 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 PTP4A1P2-201ENST00000546033 454 ntBASIC15.66■□□□□ 0.1
SMAD6O43541 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.66■□□□□ 0.1
SMAD6O43541 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.66■□□□□ 0.1
SMAD6O43541 RAB43P1-201ENST00000561790 589 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms