Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.17■□□□□ 0.18
MSI1O43347 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 AL033527.5-201ENST00000641382 801 ntBASIC16.17■□□□□ 0.18
MSI1O43347 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 AC136621.1-201ENST00000624017 2304 ntBASIC16.17■□□□□ 0.18
MSI1O43347 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MSI1O43347 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.16■□□□□ 0.18
MSI1O43347 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MSI1O43347 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 AL512384.1-201ENST00000406683 331 ntBASIC16.16■□□□□ 0.18
MSI1O43347 KRT17P7-201ENST00000451704 1104 ntBASIC16.16■□□□□ 0.18
MSI1O43347 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.16■□□□□ 0.18
MSI1O43347 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.16■□□□□ 0.18
MSI1O43347 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 AC133539.2-201ENST00000604757 467 ntBASIC16.16■□□□□ 0.18
MSI1O43347 AC107373.2-201ENST00000607735 490 ntBASIC16.16■□□□□ 0.18
MSI1O43347 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 RPSAP52-203ENST00000622976 1023 ntBASIC16.16■□□□□ 0.18
MSI1O43347 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.16■□□□□ 0.18
MSI1O43347 DRD5P1-201ENST00000456605 1438 ntBASIC16.16■□□□□ 0.18
MSI1O43347 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.16■□□□□ 0.18
MSI1O43347 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MSI1O43347 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.15■□□□□ 0.18
MSI1O43347 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
MSI1O43347 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 C1QBPP1-201ENST00000400117 770 ntBASIC16.15■□□□□ 0.18
MSI1O43347 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.15■□□□□ 0.18
MSI1O43347 TMEM14DP-201ENST00000422205 345 ntBASIC16.15■□□□□ 0.18
MSI1O43347 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.15■□□□□ 0.18
MSI1O43347 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.15■□□□□ 0.18
MSI1O43347 RPL13AP25-201ENST00000484130 612 ntBASIC16.15■□□□□ 0.18
MSI1O43347 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.15■□□□□ 0.18
MSI1O43347 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.15■□□□□ 0.18
MSI1O43347 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.15■□□□□ 0.18
MSI1O43347 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.15■□□□□ 0.18
MSI1O43347 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.15■□□□□ 0.18
MSI1O43347 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.15■□□□□ 0.18
MSI1O43347 AC020658.6-201ENST00000623564 1870 ntBASIC16.15■□□□□ 0.18
MSI1O43347 CU634019.7-201ENST00000624153 1185 ntBASIC16.15■□□□□ 0.18
MSI1O43347 FP236241.2-201ENST00000624906 1185 ntBASIC16.15■□□□□ 0.18
MSI1O43347 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MSI1O43347 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms