Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
FOXN1O15353 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXN1O15353 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.57■□□□□ 0.56
FOXN1O15353 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
FOXN1O15353 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.57■□□□□ 0.56
FOXN1O15353 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
FOXN1O15353 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXN1O15353 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXN1O15353 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXN1O15353 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXN1O15353 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXN1O15353 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXN1O15353 LINC01115-203ENST00000606068 577 ntBASIC18.57■□□□□ 0.56
FOXN1O15353 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXN1O15353 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 HYMAI-201ENST00000635591 3347 ntBASIC18.57■□□□□ 0.56
FOXN1O15353 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXN1O15353 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXN1O15353 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXN1O15353 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN1O15353 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FOXN1O15353 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 INTS4P2-202ENST00000614726 2019 ntBASIC18.56■□□□□ 0.56
FOXN1O15353 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN1O15353 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
FOXN1O15353 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 HOMER2P2-201ENST00000451621 847 ntBASIC18.56■□□□□ 0.56
FOXN1O15353 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN1O15353 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXN1O15353 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 AC005357.2-202ENST00000590507 1060 ntBASIC18.56■□□□□ 0.56
FOXN1O15353 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.56■□□□□ 0.56
FOXN1O15353 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 LINC01144-201ENST00000626198 1710 ntBASIC18.56■□□□□ 0.56
FOXN1O15353 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN1O15353 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXN1O15353 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN1O15353 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FOXN1O15353 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXN1O15353 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXN1O15353 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXN1O15353 AC016700.1-201ENST00000429424 312 ntBASIC18.55■□□□□ 0.56
FOXN1O15353 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXN1O15353 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
FOXN1O15353 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
FOXN1O15353 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.55■□□□□ 0.56
FOXN1O15353 COX5BP1-201ENST00000507622 393 ntBASIC18.55■□□□□ 0.56
FOXN1O15353 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXN1O15353 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXN1O15353 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FOXN1O15353 AC011491.1-203ENST00000637688 543 ntBASIC18.55■□□□□ 0.56
FOXN1O15353 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXN1O15353 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
FOXN1O15353 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXN1O15353 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms