Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC24.35■■□□□ 1.49
CHD1O14646 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC24.35■■□□□ 1.49
CHD1O14646 AC004686.1-201ENST00000605113 538 ntBASIC24.35■■□□□ 1.49
CHD1O14646 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 AC009560.1-201ENST00000620208 434 ntBASIC24.35■■□□□ 1.49
CHD1O14646 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC24.35■■□□□ 1.49
CHD1O14646 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CHD1O14646 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC24.34■■□□□ 1.49
CHD1O14646 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC24.34■■□□□ 1.49
CHD1O14646 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC24.34■■□□□ 1.49
CHD1O14646 MIR5001-201ENST00000580185 100 ntBASIC24.34■■□□□ 1.49
CHD1O14646 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC24.34■■□□□ 1.49
CHD1O14646 AC144522.1-201ENST00000625111 1658 ntBASIC24.34■■□□□ 1.49
CHD1O14646 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC24.34■■□□□ 1.49
CHD1O14646 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CHD1O14646 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CHD1O14646 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CHD1O14646 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC24.34■■□□□ 1.49
CHD1O14646 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD1O14646 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC24.34■■□□□ 1.49
CHD1O14646 AC004554.1-201ENST00000422830 1468 ntBASIC24.34■■□□□ 1.49
CHD1O14646 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CHD1O14646 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHD1O14646 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHD1O14646 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
CHD1O14646 MARK2P16-201ENST00000605714 1723 ntBASIC24.33■■□□□ 1.49
CHD1O14646 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC24.33■■□□□ 1.49
CHD1O14646 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHD1O14646 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CHD1O14646 SURF4-203ENST00000371991 715 ntTSL 3 BASIC24.33■■□□□ 1.49
CHD1O14646 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CHD1O14646 SERF2-209ENST00000409646 559 ntTSL 4 BASIC24.33■■□□□ 1.49
CHD1O14646 AL135901.1-201ENST00000451812 333 ntBASIC24.33■■□□□ 1.49
CHD1O14646 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC24.33■■□□□ 1.49
CHD1O14646 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHD1O14646 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CHD1O14646 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHD1O14646 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
CHD1O14646 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
CHD1O14646 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHD1O14646 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHD1O14646 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC24.33■■□□□ 1.49
CHD1O14646 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CHD1O14646 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CHD1O14646 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.48
CHD1O14646 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHD1O14646 GUSBP10-201ENST00000417412 665 ntBASIC24.32■■□□□ 1.48
CHD1O14646 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC24.32■■□□□ 1.48
CHD1O14646 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC24.32■■□□□ 1.48
CHD1O14646 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD1O14646 AC138701.2-201ENST00000553634 226 ntBASIC24.32■■□□□ 1.48
CHD1O14646 SRP14-204ENST00000558720 780 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD1O14646 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD1O14646 AC124067.4-201ENST00000519691 2379 ntBASIC24.32■■□□□ 1.48
CHD1O14646 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD1O14646 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD1O14646 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD1O14646 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD1O14646 AC026470.1-201ENST00000478038 846 ntBASIC24.32■■□□□ 1.48
CHD1O14646 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHD1O14646 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD1O14646 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC24.32■■□□□ 1.48
CHD1O14646 TP53-221ENST00000615910 1149 ntTSL 5 BASIC24.32■■□□□ 1.48
CHD1O14646 AC120498.9-201ENST00000339021 3867 ntBASIC24.32■■□□□ 1.48
CHD1O14646 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD1O14646 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD1O14646 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHD1O14646 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC24.32■■□□□ 1.48
CHD1O14646 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1O14646 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CHD1O14646 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1O14646 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1O14646 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1O14646 AC106827.1-201ENST00000366454 431 ntBASIC24.31■■□□□ 1.48
CHD1O14646 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD1O14646 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD1O14646 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC24.31■■□□□ 1.48
CHD1O14646 RBM4-207ENST00000506523 654 ntTSL 3 BASIC24.31■■□□□ 1.48
CHD1O14646 ALG3P1-201ENST00000508806 1114 ntBASIC24.31■■□□□ 1.48
CHD1O14646 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC24.31■■□□□ 1.48
CHD1O14646 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC24.31■■□□□ 1.48
CHD1O14646 AC008825.2-201ENST00000603374 718 ntBASIC24.31■■□□□ 1.48
CHD1O14646 AC010976.2-201ENST00000609697 852 ntBASIC24.31■■□□□ 1.48
CHD1O14646 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC24.31■■□□□ 1.48
CHD1O14646 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms