Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RGPD3A6NKT7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 HLA-DMA-203ENST00000395305 777 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC093909.3-201ENST00000504783 336 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC106047.2-201ENST00000511723 743 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A21P-201ENST00000510875 1396 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A15P-201ENST00000514465 1395 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A6P-201ENST00000515148 1394 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A16P-201ENST00000526662 1395 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A9P-201ENST00000527940 1395 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A5P-201ENST00000528738 1395 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A14P-201ENST00000530386 1395 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FAM90A13P-201ENST00000534703 1395 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 GUSBP10-201ENST00000417412 665 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC004522.1-201ENST00000419978 654 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 MIR2392-201ENST00000584881 84 ntBASIC19.06■□□□□ 0.64
RGPD3A6NKT7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RGPD3A6NKT7 ALOX12P2-203ENST00000570921 1945 ntBASIC19.05■□□□□ 0.64
RGPD3A6NKT7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 Z69890.1-201ENST00000382990 339 ntBASIC19.05■□□□□ 0.64
RGPD3A6NKT7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 TLE1P1-201ENST00000422965 589 ntBASIC19.05■□□□□ 0.64
RGPD3A6NKT7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RGPD3A6NKT7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 AC007952.4-201ENST00000573866 637 ntBASIC19.04■□□□□ 0.64
RGPD3A6NKT7 FTLP5-201ENST00000586853 534 ntBASIC19.04■□□□□ 0.64
RGPD3A6NKT7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms