Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 AC009078.2-202ENST00000463353 338 ntBASIC17.02■□□□□ 0.32
CCDC66A2RUB6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
CCDC66A2RUB6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 TCAF1P1-201ENST00000414990 2232 ntBASIC17.01■□□□□ 0.31
CCDC66A2RUB6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.01■□□□□ 0.31
CCDC66A2RUB6 AC140658.5-201ENST00000438532 169 ntBASIC17.01■□□□□ 0.31
CCDC66A2RUB6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 AC023141.13-201ENST00000604991 943 ntBASIC17.01■□□□□ 0.31
CCDC66A2RUB6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC66A2RUB6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 AC073439.1-201ENST00000624121 1774 ntBASIC17■□□□□ 0.31
CCDC66A2RUB6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 RNA5SP415-201ENST00000517246 115 ntBASIC17■□□□□ 0.31
CCDC66A2RUB6 IGHV3-22-201ENST00000520721 359 ntBASIC17■□□□□ 0.31
CCDC66A2RUB6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17■□□□□ 0.31
CCDC66A2RUB6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17■□□□□ 0.31
CCDC66A2RUB6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CCDC66A2RUB6 CD7-202ENST00000578509 925 ntTSL 3 BASIC17■□□□□ 0.31
CCDC66A2RUB6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 AL589702.1-201ENST00000641229 1509 ntBASIC17■□□□□ 0.31
CCDC66A2RUB6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms