Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 GHSR-202ENST00000427970 912 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 HLA-K-203ENST00000430151 1046 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC069218.1-201ENST00000435269 762 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 TUBB8P8-201ENST00000458717 1058 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 MARK2P5-201ENST00000507649 634 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 MIR4683-201ENST00000579659 81 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC005324.6-201ENST00000587972 613 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL162426.1-201ENST00000624141 743 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC068587.8-201ENST00000641239 219 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LOC102724428A0A0B4J2F2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
LOC102724428A0A0B4J2F2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LOC102724428A0A0B4J2F2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LOC102724428A0A0B4J2F2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
LOC102724428A0A0B4J2F2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 LINC02447-202ENST00000501888 2146 ntBASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC008267.1-201ENST00000474858 1069 ntBASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL662844.4-201ENST00000606367 2838 ntBASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC138932.1-201ENST00000534164 6830 ntBASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
LOC102724428A0A0B4J2F2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 AC234782.1-201ENST00000451950 919 ntBASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 AL358472.3-201ENST00000608147 415 ntBASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.5■□□□□ 0.71
LOC102724428A0A0B4J2F2 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms