Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC136621.1-201ENST00000624017 2304 ntBASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC074338.1-201ENST00000416825 156 ntBASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC004890.2-204ENST00000481968 304 ntBASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC093214.1-201ENST00000511688 1107 ntBASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AC005498.2-205ENST00000593218 784 ntBASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 AL117378.2-201ENST00000622916 1337 ntBASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB13Q9Y5F0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 RNA5SP421-201ENST00000516864 134 ntBASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 AC022144.1-201ENST00000602255 1580 ntBASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHB13Q9Y5F0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms