Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AL139010.1-201ENST00000454878 894 ntBASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AC093909.1-201ENST00000504731 1122 ntBASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 HNRNPUP1-201ENST00000554987 333 ntBASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 RARRES2P8-201ENST00000566335 367 ntBASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UBE2D4Q9Y2X8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 AC079776.4-201ENST00000511039 504 ntBASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 IGHV3-22-201ENST00000520721 359 ntBASIC10.9□□□□□ -0.66
UBE2D4Q9Y2X8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms