Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 REXO1L5P-201ENST00000622260 2098 ntBASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 AP000812.2-201ENST00000538934 718 ntBASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 AC145423.3-201ENST00000615987 467 ntBASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NPC1L1Q9UHC9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 ACE3P-201ENST00000423435 1973 ntBASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 CNN2P8-201ENST00000421872 913 ntBASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NPC1L1Q9UHC9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 BOLA2P3-201ENST00000404566 256 ntBASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 POM121L8P-201ENST00000417732 1281 ntBASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 POM121L9P-203ENST00000441984 1285 ntBASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPC1L1Q9UHC9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms