Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 AC244107.1-201ENST00000442033 332 ntBASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 AC127383.1-201ENST00000444697 1800 ntBASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 AC090616.6-203ENST00000579186 1945 ntBASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HMG20BQ9P0W2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 ATP5G2P4-201ENST00000442175 420 ntBASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 IGHV3-71-201ENST00000523324 359 ntBASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 BTNL10-201ENST00000595971 695 ntBASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AL512343.1-201ENST00000605837 169 ntBASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 AC009090.5-201ENST00000624886 2285 ntBASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 MSTO2P-201ENST00000314835 1709 ntBASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20BQ9P0W2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AC087481.3-201ENST00000602886 1894 ntBASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms