Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 UXT-AS1-201ENST00000590504 1525 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AC007292.2-201ENST00000593524 1812 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AL627223.1-201ENST00000416693 442 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 KRT18P32-201ENST00000424695 1287 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 RPS8P6-201ENST00000426177 609 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AC069335.1-201ENST00000489972 472 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AP000842.3-202ENST00000569238 1080 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AC084121.4-201ENST00000641598 221 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AF228730.8-201ENST00000642140 221 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 REXO1L1P-202ENST00000608646 1974 ntBASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LIN7CQ9NUP9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AC127383.1-201ENST00000444697 1800 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 MIR346-201ENST00000362234 95 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AC023141.5-201ENST00000458585 616 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AC098859.1-201ENST00000502915 1238 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 LINC01225-203ENST00000563550 1244 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AP001160.2-201ENST00000596071 487 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 AL596442.2-201ENST00000610240 980 ntBASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LIN7CQ9NUP9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms