Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 AL121956.5-201ENST00000625261 221 ntBASIC18.64■□□□□ 0.57
RTN4Q9NQC3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 AL020989.1-201ENST00000422979 469 ntBASIC18.63■□□□□ 0.57
RTN4Q9NQC3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.63■□□□□ 0.57
RTN4Q9NQC3 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTN4Q9NQC3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 SPDYE21P-201ENST00000413323 827 ntBASIC18.62■□□□□ 0.57
RTN4Q9NQC3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 DRAXINP1-201ENST00000437611 948 ntBASIC18.62■□□□□ 0.57
RTN4Q9NQC3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 SETP4-201ENST00000455717 868 ntBASIC18.62■□□□□ 0.57
RTN4Q9NQC3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 FAM86EP-206ENST00000510506 987 ntBASIC18.62■□□□□ 0.57
RTN4Q9NQC3 TPSP2-201ENST00000561760 610 ntBASIC18.62■□□□□ 0.57
RTN4Q9NQC3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 SYT14P1-202ENST00000600441 1448 ntBASIC18.62■□□□□ 0.57
RTN4Q9NQC3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN4Q9NQC3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms