Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.75■□□□□ 0.27
NXF3Q9H4D5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NXF3Q9H4D5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 KRT8P35-201ENST00000483942 1338 ntBASIC16.74■□□□□ 0.27
NXF3Q9H4D5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 HLA-V-201ENST00000429037 534 ntBASIC16.74■□□□□ 0.27
NXF3Q9H4D5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 KRT18P25-201ENST00000508931 1278 ntBASIC16.74■□□□□ 0.27
NXF3Q9H4D5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 AC105250.1-201ENST00000509378 2057 ntBASIC16.74■□□□□ 0.27
NXF3Q9H4D5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NXF3Q9H4D5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 CSF2RBP1-201ENST00000447905 391 ntBASIC16.73■□□□□ 0.27
NXF3Q9H4D5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 AC145423.3-201ENST00000615987 467 ntBASIC16.73■□□□□ 0.27
NXF3Q9H4D5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 TNRC18P3-201ENST00000441896 2691 ntBASIC16.73■□□□□ 0.27
NXF3Q9H4D5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.73■□□□□ 0.27
NXF3Q9H4D5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NXF3Q9H4D5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms