Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 MIR346-201ENST00000362234 95 ntBASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 FAM86C2P-203ENST00000528684 1004 ntBASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 LINC01225-203ENST00000563550 1244 ntBASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 AC007191.1-201ENST00000623179 2995 ntBASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
HDHD3Q9BSH5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 AC117489.1-201ENST00000625169 3217 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 ZBED1P1-201ENST00000502364 1930 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 AL591424.1-201ENST00000442569 1213 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 TIMM8BP1-201ENST00000452384 211 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 IGHV3-62-201ENST00000520057 340 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SLC25A39P2-201ENST00000537614 270 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 AC120114.3-201ENST00000611923 658 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 AC005089.1-201ENST00000619486 2241 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 AP3S2-216ENST00000617003 1561 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 UXT-AS1-201ENST00000590504 1525 ntBASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
HDHD3Q9BSH5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms