Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 BOLA2P3-201ENST00000404566 256 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 TOMM22P5-201ENST00000416399 439 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 KRT43P-201ENST00000434019 910 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 PHKG1P2-201ENST00000457537 863 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 AC092658.1-201ENST00000505836 891 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 TDH-203ENST00000531764 1110 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 HNRNPUP1-201ENST00000554987 333 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 REXO1L6P-201ENST00000603433 1515 ntBASIC12.72□□□□□ -0.37
ZNF48Q96MX3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF48Q96MX3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 REXO1L1P-202ENST00000608646 1974 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AP005117.1-202ENST00000581724 1908 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 HAUS4P1-201ENST00000406739 1145 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 ACTG1P3-201ENST00000431775 1114 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 SLED1-202ENST00000512051 380 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AC124283.3-201ENST00000570869 594 ntBASIC12.71□□□□□ -0.37
ZNF48Q96MX3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
ZNF48Q96MX3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms