Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 AC098614.1-201ENST00000368528 745 ntBASIC18.57■□□□□ 0.56
DDX11Q96FC9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX11Q96FC9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX11Q96FC9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.56■□□□□ 0.56
DDX11Q96FC9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 DGCR5-201ENST00000399539 862 ntBASIC18.56■□□□□ 0.56
DDX11Q96FC9 SPDYE17-201ENST00000412399 783 ntBASIC18.56■□□□□ 0.56
DDX11Q96FC9 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 AC093004.1-201ENST00000508850 424 ntBASIC18.56■□□□□ 0.56
DDX11Q96FC9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 MIR6069-201ENST00000620069 79 ntBASIC18.56■□□□□ 0.56
DDX11Q96FC9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX11Q96FC9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX11Q96FC9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 AC114501.2-201ENST00000439631 535 ntBASIC18.55■□□□□ 0.56
DDX11Q96FC9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 MEIS3P1-201ENST00000495167 958 ntBASIC18.55■□□□□ 0.56
DDX11Q96FC9 SDHAP3-202ENST00000515467 728 ntBASIC18.55■□□□□ 0.56
DDX11Q96FC9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 AL450472.2-201ENST00000603663 1156 ntBASIC18.55■□□□□ 0.56
DDX11Q96FC9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms