Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFT1Q96AA3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AC073439.1-201ENST00000624121 1774 ntBASIC13.91□□□□□ -0.18
RFT1Q96AA3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AC109635.5-201ENST00000533593 962 ntBASIC13.91□□□□□ -0.18
RFT1Q96AA3 KRT126P-201ENST00000549467 1181 ntBASIC13.91□□□□□ -0.18
RFT1Q96AA3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 KRT8P44-201ENST00000441609 1350 ntBASIC13.91□□□□□ -0.18
RFT1Q96AA3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 AC148477.4-201ENST00000613430 1793 ntBASIC13.91□□□□□ -0.18
RFT1Q96AA3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFT1Q96AA3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.91□□□□□ -0.18
RFT1Q96AA3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC104109.2-201ENST00000602919 1418 ntBASIC13.9□□□□□ -0.18
RFT1Q96AA3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC126365.1-201ENST00000578585 1514 ntBASIC13.9□□□□□ -0.18
RFT1Q96AA3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC092474.2-201ENST00000424288 719 ntBASIC13.9□□□□□ -0.18
RFT1Q96AA3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC079776.4-201ENST00000511039 504 ntBASIC13.9□□□□□ -0.18
RFT1Q96AA3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC064836.3-201ENST00000607928 673 ntBASIC13.9□□□□□ -0.18
RFT1Q96AA3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms