Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC006486.2-201ENST00000624246 2199 ntBASIC15.03■□□□□ -0
UBE2E3Q969T4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.03■□□□□ -0
UBE2E3Q969T4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.03■□□□□ -0
UBE2E3Q969T4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.03■□□□□ -0
UBE2E3Q969T4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.03■□□□□ -0
UBE2E3Q969T4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 KRT18P43-201ENST00000469825 1281 ntBASIC15.03■□□□□ -0
UBE2E3Q969T4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.03■□□□□ -0
UBE2E3Q969T4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBE2E3Q969T4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.03■□□□□ -0
UBE2E3Q969T4 AL844908.2-201ENST00000609461 460 ntBASIC15.03■□□□□ -0
UBE2E3Q969T4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.03■□□□□ -0
UBE2E3Q969T4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.03■□□□□ -0
UBE2E3Q969T4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.03■□□□□ -0
UBE2E3Q969T4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.03■□□□□ -0
UBE2E3Q969T4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.03■□□□□ -0
UBE2E3Q969T4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.03■□□□□ -0
UBE2E3Q969T4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
UBE2E3Q969T4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.03■□□□□ -0
UBE2E3Q969T4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 AC006058.4-201ENST00000624016 1670 ntBASIC15.03■□□□□ -0
UBE2E3Q969T4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBE2E3Q969T4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.03■□□□□ -0
UBE2E3Q969T4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBE2E3Q969T4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.02■□□□□ -0
UBE2E3Q969T4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.02■□□□□ -0
UBE2E3Q969T4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
UBE2E3Q969T4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.02■□□□□ -0
UBE2E3Q969T4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.02■□□□□ -0
UBE2E3Q969T4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
UBE2E3Q969T4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
UBE2E3Q969T4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.02■□□□□ -0
UBE2E3Q969T4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 AC055876.3-201ENST00000431496 288 ntBASIC15.02■□□□□ -0
UBE2E3Q969T4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.02■□□□□ -0
UBE2E3Q969T4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
UBE2E3Q969T4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.02■□□□□ -0
UBE2E3Q969T4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.02■□□□□ -0
UBE2E3Q969T4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBE2E3Q969T4 DUX4L27-201ENST00000554796 1261 ntBASIC15.02■□□□□ -0
UBE2E3Q969T4 AC044860.1-202ENST00000559481 777 ntBASIC15.02■□□□□ -0
UBE2E3Q969T4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.02■□□□□ -0
UBE2E3Q969T4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.02■□□□□ -0
UBE2E3Q969T4 AC138649.4-201ENST00000612222 287 ntBASIC15.02■□□□□ -0
UBE2E3Q969T4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.02■□□□□ -0
UBE2E3Q969T4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 AC138035.3-201ENST00000622706 2791 ntBASIC15.02□□□□□ -0.01
UBE2E3Q969T4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.02□□□□□ -0.01
UBE2E3Q969T4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBE2E3Q969T4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms