Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 CICP11-201ENST00000434745 2827 ntBASIC13.71□□□□□ -0.21
TMEM54Q969K7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 AC104457.1-201ENST00000401024 814 ntBASIC13.71□□□□□ -0.21
TMEM54Q969K7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 MEP1AP4-201ENST00000423244 1087 ntBASIC13.71□□□□□ -0.21
TMEM54Q969K7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 GNAQP1-201ENST00000444815 1067 ntBASIC13.71□□□□□ -0.21
TMEM54Q969K7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 AC036164.1-201ENST00000570544 333 ntBASIC13.71□□□□□ -0.21
TMEM54Q969K7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TMEM54Q969K7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.71□□□□□ -0.21
TMEM54Q969K7 AC144831.1-201ENST00000573312 2656 ntBASIC13.71□□□□□ -0.22
TMEM54Q969K7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM54Q969K7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TMEM54Q969K7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.71□□□□□ -0.22
TMEM54Q969K7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
TMEM54Q969K7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
TMEM54Q969K7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM54Q969K7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM54Q969K7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM54Q969K7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM54Q969K7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.71□□□□□ -0.22
TMEM54Q969K7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM54Q969K7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TMEM54Q969K7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 SPTLC1P1-201ENST00000447199 261 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 TSPY16P-201ENST00000449843 468 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 RN7SL399P-201ENST00000471648 279 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 FAM86LP-201ENST00000478302 853 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 AC093004.1-201ENST00000508850 424 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 RRP7BP-205ENST00000566851 833 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 AL096865.1-201ENST00000606796 927 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM54Q969K7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 WASH3P-207ENST00000560956 1394 ntBASIC13.7□□□□□ -0.22
TMEM54Q969K7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
TMEM54Q969K7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 MST1L-201ENST00000442552 2185 ntBASIC13.69□□□□□ -0.22
TMEM54Q969K7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM54Q969K7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms