Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AC243562.2-201ENST00000561247 970 ntBASIC16.51■□□□□ 0.23
ATP2A3Q93084 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 ELK1P1-201ENST00000485699 580 ntBASIC16.5■□□□□ 0.23
ATP2A3Q93084 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 AC104640.1-201ENST00000562617 2109 ntBASIC16.5■□□□□ 0.23
ATP2A3Q93084 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 AL162274.1-201ENST00000617191 1098 ntBASIC16.5■□□□□ 0.23
ATP2A3Q93084 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 AP005117.1-202ENST00000581724 1908 ntBASIC16.5■□□□□ 0.23
ATP2A3Q93084 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.5■□□□□ 0.23
ATP2A3Q93084 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A3Q93084 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A3Q93084 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A3Q93084 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A3Q93084 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms