Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 MIR3687-1-201ENST00000614492 61 ntBASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 LINC00528-201ENST00000600723 2160 ntBASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 LINC00552-201ENST00000625151 2579 ntBASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RTN4IP1Q8WWV3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 ST20-AS1-201ENST00000560255 4223 ntBASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 MROH4P-201ENST00000431302 1578 ntBASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 CEND1P1-201ENST00000451006 455 ntBASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 AC079140.1-201ENST00000508039 487 ntBASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 KRT8P48-201ENST00000515599 1220 ntBASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RTN4IP1Q8WWV3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RTN4IP1Q8WWV3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms