Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 KRT8P44-201ENST00000441609 1350 ntBASIC18.3■□□□□ 0.52
STAG1Q8WVM7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 AC104457.1-201ENST00000401024 814 ntBASIC18.3■□□□□ 0.52
STAG1Q8WVM7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 SOCS2P1-201ENST00000417727 557 ntBASIC18.3■□□□□ 0.52
STAG1Q8WVM7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 RPSAP52-203ENST00000622976 1023 ntBASIC18.3■□□□□ 0.52
STAG1Q8WVM7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
STAG1Q8WVM7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AL162726.2-201ENST00000438986 1017 ntBASIC18.29■□□□□ 0.52
STAG1Q8WVM7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
STAG1Q8WVM7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 AL138799.1-201ENST00000448213 1675 ntBASIC18.28■□□□□ 0.52
STAG1Q8WVM7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 AC022532.1-201ENST00000624563 1728 ntBASIC18.28■□□□□ 0.52
STAG1Q8WVM7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
STAG1Q8WVM7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms