Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SMIM4Q8WVI0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 NPAP1P7-201ENST00000613027 823 ntBASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.37□□□□□ -0.27
SMIM4Q8WVI0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SMIM4Q8WVI0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms