Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 AL009183.1-201ENST00000603760 355 ntBASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 MIR7706-201ENST00000613747 67 ntBASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 AC027601.5-201ENST00000624065 2482 ntBASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RFWD2Q8NHY2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC097359.2-201ENST00000604992 2389 ntBASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC117500.6-201ENST00000624871 588 ntBASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC015656.1-201ENST00000624209 3578 ntBASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFWD2Q8NHY2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 ACE3P-201ENST00000423435 1973 ntBASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.49■□□□□ 0.07
RFWD2Q8NHY2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms