Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 KRT8P44-201ENST00000441609 1350 ntBASIC15.26■□□□□ 0.03
HIPK4Q8NE63 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.26■□□□□ 0.03
HIPK4Q8NE63 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 UNC93B7-201ENST00000509439 705 ntBASIC15.26■□□□□ 0.03
HIPK4Q8NE63 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 MIR4751-201ENST00000578027 74 ntBASIC15.26■□□□□ 0.03
HIPK4Q8NE63 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 AC117500.6-201ENST00000624871 588 ntBASIC15.26■□□□□ 0.03
HIPK4Q8NE63 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.26■□□□□ 0.03
HIPK4Q8NE63 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 AL513480.1-201ENST00000451731 511 ntBASIC15.25■□□□□ 0.03
HIPK4Q8NE63 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HIPK4Q8NE63 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AC148477.4-201ENST00000613430 1793 ntBASIC15.24■□□□□ 0.03
HIPK4Q8NE63 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AC023024.2-201ENST00000623561 1993 ntBASIC15.24■□□□□ 0.03
HIPK4Q8NE63 AC134407.2-201ENST00000625089 1978 ntBASIC15.24■□□□□ 0.03
HIPK4Q8NE63 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIPK4Q8NE63 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms