Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AP003680.1-201ENST00000598970 3660 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AC063926.2-201ENST00000623766 1308 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC098614.1-201ENST00000368528 745 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC136604.1-201ENST00000418535 575 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 RPL13P2-201ENST00000440687 659 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 RARRES2P5-201ENST00000564013 466 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 RRP7BP-205ENST00000566851 833 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC099568.2-201ENST00000609194 695 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC018892.3-201ENST00000623986 2499 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC138969.3-201ENST00000546612 1459 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC138932.2-201ENST00000548268 1459 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AC126755.4-201ENST00000549796 1459 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 AL161772.1-201ENST00000610494 4412 ntBASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM48Q8IWZ4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM48Q8IWZ4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms